Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Antitermination protein q | FE383_RS02770 | Not Available | Positive | 563167 - 563550 | 14177.3 |
| Is5 transposase and trans-activator | FE383_RS02775 | Not Available | Negative | 563948 - 564928 | 37853.6 |
| porin | FE383_RS02780 | Not Available | Negative | 564925 - 566028 | 40504.4 |
| Putative holin | FE383_RS02785 | Not Available | Positive | 566601 - 566816 | 7778.49 |
| Lysozyme | FE383_RS02790 | Not Available | Positive | 566816 - 567313 | 17972.8 |
| Rz1 protein | FE383_RS02795 | Not Available | Positive | 567530 - 567712 | 6690.59 |
| Putative lipoprotein bor | FE383_RS02800 | Not Available | Negative | 567803 - 568096 | 10447.8 |
| Putative envelope protein | FE383_RS02805 | Not Available | Negative | 568386 - 568796 | 16401.6 |
| Hypothetical protein | FE383_RS02810 | Not Available | Positive | 569082 - 569288 | 7624.14 |
| Hypothetical protein | FE383_RS02815 | Not Available | Negative | 569453 - 569647 | 7520.93 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





