Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transporter carrier protein brnq | FE383_RS02005 | Not Available | Positive | 408814 - 410133 | 46211.5 |
| proline-specific permease proy | FE383_RS02010 | Not Available | Positive | 410209 - 411582 | 50218.8 |
| maltodextrin glucosidase | FE383_RS02015 | Not Available | Positive | 411738 - 413555 | 69175.9 |
| acp phosphodiesterase | FE383_RS02020 | Not Available | Negative | 413560 - 414141 | 22962.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | FE383_RS02025 | Not Available | Positive | 414234 - 415304 | 39433.0 |
| trna guanosine(34) transglycosylase tgt | FE383_RS02030 | Not Available | Positive | 415360 - 416487 | 42596.1 |
| preprotein translocase subunit yajc | FE383_RS02035 | Not Available | Positive | 416510 - 416842 | 11887.9 |
| protein translocase subunit secd | FE383_RS02040 | Not Available | Positive | 416870 - 418717 | 66636.3 |
| protein translocase subunit secf | FE383_RS02045 | Not Available | Positive | 418728 - 419699 | 35384.6 |
| hnh nuclease yajd | FE383_RS02050 | Not Available | Positive | 419828 - 420175 | 13364.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





