Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine/purine nucleoside phosphorylase | FE383_RS01955 | Not Available | Positive | 397400 - 397684 | 10234.9 |
| hypothetical protein | FE383_RS01960 | Not Available | Positive | 397832 - 398173 | 12944.4 |
| protein ykid | FE383_RS01965 | Not Available | Positive | 398170 - 398253 | 3234.02 |
| recombination-associated protein rdgc | FE383_RS01970 | Not Available | Negative | 398331 - 399242 | 33995.3 |
| fructokinase | FE383_RS01975 | Not Available | Positive | 399367 - 400275 | 32501.7 |
| mfs transporter araj | FE383_RS01980 | Not Available | Negative | 400520 - 401704 | 41929.0 |
| exonuclease subunit sbcc | FE383_RS01985 | Not Available | Negative | 401830 - 404976 | 118728.0 |
| exonuclease subunit sbcd | FE383_RS01990 | Not Available | Negative | 404973 - 406175 | 44716.1 |
| phosphate response regulator transcription factor phob | FE383_RS01995 | Not Available | Positive | 406365 - 407054 | 26435.0 |
| phosphate regulon sensor histidine kinase phor | FE383_RS02000 | Not Available | Positive | 407112 - 408407 | 49632.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





