Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS22340 | Not Available | Positive | 390379 - 390537 | 6174.78 |
| anti-adapter protein irap | FE383_RS01910 | Not Available | Positive | 390609 - 390869 | 9938.05 |
| alkaline phosphatase | FE383_RS01915 | Not Available | Positive | 390970 - 392385 | 49441.3 |
| phosphate starvation-inducible protein psif | FE383_RS01920 | Not Available | Positive | 392504 - 392824 | 11687.2 |
| diguanylate cyclase adra | FE383_RS01925 | Not Available | Positive | 392926 - 394041 | 41539.9 |
| pyrroline-5-carboxylate reductase | FE383_RS01930 | Not Available | Negative | 394058 - 394867 | 28146.6 |
| yaii/yqxd family protein | FE383_RS01935 | Not Available | Positive | 394987 - 395445 | 16970.4 |
| shikimate kinase arol | FE383_RS01940 | Not Available | Positive | 395628 - 396152 | 19151.9 |
| protein yaia | FE383_RS01945 | Not Available | Positive | 396202 - 396393 | 7281.55 |
| arom family protein | FE383_RS01950 | Not Available | Positive | 396651 - 397328 | 24918.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





