Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS01860 | Not Available | Positive | 379629 - 381155 | 55443.9 |
| is3-like element is3 family transposase | FE383_RS01865 | Not Available | Negative | 381117 - 382279 | 45023.8 |
| hypothetical protein | FE383_RS01870 | Not Available | Positive | 382351 - 383796 | 51726.1 |
| hydrogen peroxide resistance inhibitor ipra | FE383_RS01875 | Not Available | Positive | 383884 - 384507 | 23957.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | FE383_RS01880 | Not Available | Negative | 384508 - 385665 | 41851.5 |
| peptide antibiotic transporter sbma | FE383_RS01885 | Not Available | Positive | 386017 - 387237 | 46461.9 |
| surface-exposed outer membrane lipoprotein yaiw | FE383_RS01890 | Not Available | Positive | 387250 - 388344 | 40416.5 |
| yaiy family protein | FE383_RS01895 | Not Available | Negative | 388403 - 388711 | 11425.2 |
| duf2754 domain-containing protein | FE383_RS01900 | Not Available | Positive | 388971 - 389183 | 8097.92 |
| d-alanine--d-alanine ligase | FE383_RS01905 | Not Available | Negative | 389207 - 390301 | 39318.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





