Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | FE383_RS01760 | Not Available | Positive | 361494 - 362303 | 28891.6 |
| acetaldehyde dehydrogenase | FE383_RS01765 | Not Available | Positive | 362300 - 363250 | 33444.5 |
| 4-hydroxy-2-oxovalerate aldolase | FE383_RS01770 | Not Available | Positive | 363247 - 364260 | 36472.6 |
| hypothetical protein | FE383_RS22700 | Not Available | Positive | 364505 - 364674 | 5648.82 |
| 3-(3-hydroxy-phenyl)propionate transporter | FE383_RS01775 | Not Available | Positive | 364838 - 366049 | 41553.4 |
| duf2058 domain-containing protein | FE383_RS01780 | Not Available | Positive | 366151 - 366690 | 19923.8 |
| s-formylglutathione hydrolase | FE383_RS01785 | Not Available | Negative | 366914 - 367747 | 31426.2 |
| s-(hydroxymethyl)glutathione dehydrogenase | FE383_RS01790 | Not Available | Negative | 367841 - 368950 | 39319.2 |
| formaldehyde-responsive transcriptional repressor frmr | FE383_RS01795 | Not Available | Negative | 368985 - 369260 | 10318.3 |
| yaio family outer membrane beta-barrel protein | FE383_RS01800 | Not Available | Negative | 369448 - 370221 | 29041.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





