Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 family periplasmic protein yaho | FE383_RS01660 | Not Available | Positive | 335863 - 336138 | 9895.93 |
| propionate catabolism operon regulatory protein prpr | FE383_RS01665 | Not Available | Negative | 336236 - 337822 | 58652.9 |
| methylisocitrate lyase | FE383_RS01670 | Not Available | Positive | 338061 - 338951 | 32136.5 |
| 2-methylcitrate synthase | FE383_RS01675 | Not Available | Positive | 339391 - 340560 | 43104.6 |
| 2-methylcitrate dehydratase | FE383_RS01680 | Not Available | Positive | 340594 - 342045 | 53954.7 |
| propionate--coa ligase | FE383_RS01685 | Not Available | Positive | 342085 - 343971 | 69354.7 |
| cytosine permease | FE383_RS01690 | Not Available | Positive | 344301 - 345560 | 43652.3 |
| cytosine/isoguanine deaminase | FE383_RS01695 | Not Available | Positive | 345550 - 346833 | 47593.8 |
| transcriptional regulator cynr | FE383_RS01700 | Not Available | Negative | 347170 - 348069 | 32962.8 |
| carbonic anhydrase cynt | FE383_RS01705 | Not Available | Positive | 348178 - 348837 | 23765.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





