Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FE383_RS01520 | Not Available | Positive | 306818 - 306946 | 4697.56 |
| reactive chlorine species resistance protein rclc | FE383_RS01525 | Not Available | Negative | 307105 - 307698 | 21900.7 |
| reactive chlorine resistance periplasmic protein rclb | FE383_RS01530 | Not Available | Negative | 307710 - 307946 | 8472.22 |
| reactive chlorine resistance oxidoreductase rcla | FE383_RS01535 | Not Available | Negative | 308055 - 309380 | 48247.1 |
| reactive chlorine-specific transcriptional regulator rclr | FE383_RS01540 | Not Available | Positive | 309606 - 310460 | 31476.2 |
| (fe-s)-binding protein | FE383_RS01545 | Not Available | Positive | 310987 - 311706 | 26005.8 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | FE383_RS01550 | Not Available | Positive | 311717 - 313144 | 53055.0 |
| lactate utilization protein c | FE383_RS01555 | Not Available | Positive | 313137 - 313832 | 25214.2 |
| protein ykgh | FE383_RS01560 | Not Available | Negative | 314075 - 314743 | 25590.3 |
| choline dehydrogenase | FE383_RS01565 | Not Available | Negative | 314956 - 316626 | 61881.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





