Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| common pilus major fimbrillin subunit ecpa | FE383_RS01470 | Not Available | Negative | 299463 - 300050 | 20112.5 |
| ecp biosynthesis operon dna-binding transcriptional regulator ecpr | FE383_RS01475 | Not Available | Negative | 300125 - 300667 | 21233.7 |
| protein ykgl | FE383_RS01480 | Not Available | Positive | 301491 - 301718 | 8767.41 |
| type b 50s ribosomal protein l36 | FE383_RS01485 | Not Available | Negative | 301753 - 301893 | 5466.94 |
| type b 50s ribosomal protein l31 | FE383_RS01490 | Not Available | Negative | 301893 - 302156 | 9920.71 |
| small membrane protein ykgr | FE383_RS22820 | Not Available | Negative | 302520 - 302621 | 3999.01 |
| hypothetical protein | FE383_RS22585 | Not Available | Negative | 303095 - 303184 | 3368.04 |
| hypothetical protein | FE383_RS01505 | Not Available | Positive | 303736 - 304611 | 32819.5 |
| is3-like element is3 family transposase | FE383_RS01510 | Not Available | Positive | 304670 - 305832 | 45023.8 |
| hypothetical protein | FE383_RS01515 | Not Available | Negative | 305862 - 306515 | 25917.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





