Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1-like element is1a family transposase | FE383_RS01210 | Not Available | Negative | 257922 - 258619 | 26455.2 |
| hypothetical protein | FE383_RS01215 | Not Available | Positive | 258676 - 259005 | 12961.3 |
| phosphoporin phoe | FE383_RS01220 | Not Available | Negative | 259044 - 260099 | 38924.1 |
| glutamate 5-kinase | FE383_RS01225 | Not Available | Positive | 260387 - 261490 | 39058.9 |
| glutamate-5-semialdehyde dehydrogenase | FE383_RS01230 | Not Available | Positive | 261502 - 262755 | 44632.7 |
| Trna-thr | Not Available | Not Available | Positive | 262870 - 262945 | Not Available |
| type iv toxin-antitoxin system toxin ykfi | FE383_RS01240 | Not Available | Negative | 263327 - 263668 | 12905.8 |
| type iv toxin-antitoxin system antitoxin yafw | FE383_RS01245 | Not Available | Negative | 263689 - 264006 | 11940.3 |
| Trna-thr | Not Available | Not Available | Positive | 286556 - 286632 | Not Available |
| hypothetical protein | FE383_RS01415 | Not Available | Negative | 286759 - 287097 | 13084.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





