Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | FE383_RS22265 | Not Available | Negative | 4592218 - 4593885 | 62446.5 |
| murein transglycosylase | FE383_RS22270 | Not Available | Positive | 4594096 - 4596033 | 73357.1 |
| trp operon repressor | FE383_RS22275 | Not Available | Positive | 4596123 - 4596449 | 12355.9 |
| inosine/xanthosine triphosphatase | FE383_RS22280 | Not Available | Negative | 4596596 - 4597108 | 18213.7 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase gpmb | FE383_RS22285 | Not Available | Positive | 4597160 - 4597807 | 24066.7 |
| mdr efflux pump acrab transcriptional activator roba | FE383_RS22290 | Not Available | Negative | 4597804 - 4598673 | 33146.8 |
| protein crea | FE383_RS22295 | Not Available | Positive | 4598884 - 4599357 | 17108.8 |
| two-component system response regulator creb | FE383_RS22300 | Not Available | Positive | 4599370 - 4600059 | 26126.8 |
| two-component system sensor histidine kinase crec | FE383_RS22305 | Not Available | Positive | 4600059 - 4601483 | 52179.3 |
| cell envelope integrity protein cred | FE383_RS22310 | Not Available | Positive | 4601541 - 4602893 | 49832.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





