Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | FE383_RS01160 | Not Available | Positive | 250897 - 251952 | 39518.2 |
| type i toxin-antitoxin system antitoxin yafn | FE383_RS01165 | Not Available | Positive | 252004 - 252297 | 11234.4 |
| type ii toxin-antitoxin system mrna interferase toxin yafo | FE383_RS01170 | Not Available | Positive | 252300 - 252698 | 15488.7 |
| gnat family n-acetyltransferase | FE383_RS01175 | Not Available | Positive | 252708 - 253160 | 17556.1 |
| hypothetical protein | FE383_RS01180 | Not Available | Positive | 253478 - 253684 | 7621.23 |
| hypothetical protein | FE383_RS01185 | Not Available | Positive | 253680 - 254201 | 19572.9 |
| cytosol nonspecific dipeptidase | FE383_RS01190 | Not Available | Negative | 254258 - 255715 | 52918.5 |
| xanthine phosphoribosyltransferase | FE383_RS01195 | Not Available | Positive | 255976 - 256434 | 16971.6 |
| esterase frsa | FE383_RS01200 | Not Available | Positive | 256526 - 257770 | 47011.4 |
| hypothetical protein | FE383_RS01205 | Not Available | Positive | 257828 - 257908 | 3054.84 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





