Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | FE383_RS21875 | Not Available | Positive | 4507105 - 4507644 | 19374.4 |
| type 1 fimbria chaperone fimc | FE383_RS21880 | Not Available | Positive | 4507681 - 4508406 | 26690.5 |
| fimbrial usher fimd | FE383_RS21885 | Not Available | Positive | 4508473 - 4511109 | 96487.8 |
| type 1 fimbria minor subunit fimf | FE383_RS21890 | Not Available | Positive | 4511119 - 4511649 | 18716.3 |
| fimbrial protein | FE383_RS21895 | Not Available | Positive | 4511722 - 4512165 | 15187.5 |
| type 1 fimbria d-mannose specific adhesin fimh | FE383_RS21900 | Not Available | Positive | 4512185 - 4513087 | 31475.2 |
| gluconate permease gntp | FE383_RS21905 | Not Available | Negative | 4513330 - 4514673 | 47141.0 |
| mannonate dehydratase | FE383_RS21910 | Not Available | Positive | 4515013 - 4516197 | 44840.5 |
| fructuronate reductase | FE383_RS21915 | Not Available | Positive | 4516278 - 4517738 | 53583.2 |
| uxu operon transcriptional regulator | FE383_RS21920 | Not Available | Positive | 4517953 - 4518726 | 29309.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





