Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric citrate uptake sigma factor regulator fecr | FE383_RS21740 | Not Available | Negative | 4480142 - 4481095 | 35534.1 |
| rna polymerase sigma factor feci | FE383_RS21745 | Not Available | Negative | 4481092 - 4481613 | 19481.5 |
| protein ykie | FE383_RS22575 | Not Available | Positive | 4481750 - 4481818 | 2720.32 |
| hypothetical protein | FE383_RS21750 | Not Available | Positive | 4481905 - 4482602 | 24877.9 |
| sugar-binding transcriptional regulator | FE383_RS21755 | Not Available | Negative | 4482716 - 4483702 | 36113.8 |
| gntp family permease | FE383_RS21760 | Not Available | Negative | 4484049 - 4485398 | 47006.8 |
| xylonate dehydratase yjhg | FE383_RS21765 | Not Available | Negative | 4485505 - 4487472 | 70021.0 |
| dihydrodipicolinate synthase family protein | FE383_RS21770 | Not Available | Negative | 4487483 - 4488388 | 32723.5 |
| iclr family transcriptional regulator | FE383_RS21775 | Not Available | Negative | 4488393 - 4489181 | 29878.3 |
| deor/glpr family dna-binding transcription regulator | FE383_RS21780 | Not Available | Negative | 4489484 - 4490266 | 29269.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





