Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is30-like element is30 family transposase | FE383_RS21695 | Not Available | Negative | 4470844 - 4471995 | 44283.5 |
| hypothetical protein | FE383_RS22675 | Not Available | Negative | 4471992 - 4472078 | 3556.28 |
| hypothetical protein | FE383_RS21700 | Not Available | Negative | 4472060 - 4472320 | 9668.71 |
| hypothetical protein | FE383_RS21705 | Not Available | Positive | 4472387 - 4473171 | 28432.4 |
| hypothetical protein | FE383_RS21710 | Not Available | Positive | 4473254 - 4473511 | 9465.12 |
| fe(3+) dicitrate abc transporter atp-binding protein fece | FE383_RS21715 | Not Available | Negative | 4474068 - 4474835 | 28192.5 |
| fe(3+) dicitrate abc transporter permease subunit fecd | FE383_RS21720 | Not Available | Negative | 4474836 - 4475792 | 34133.7 |
| iron-dicitrate abc transporter permease fecc | FE383_RS21725 | Not Available | Negative | 4475789 - 4476787 | 34894.9 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | FE383_RS21730 | Not Available | Negative | 4476784 - 4477686 | 33148.2 |
| tonb-dependent fe(3+) dicitrate receptor feca | FE383_RS21735 | Not Available | Negative | 4477731 - 4480055 | 85326.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





