Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | FE383_RS21590 | Not Available | Positive | 4450719 - 4451801 | 39621.0 |
| helicase hera-like c-terminal domain-containing protein | FE383_RS21595 | Not Available | Negative | 4451962 - 4453464 | 54363.6 |
| dna-binding transcriptional regulator idnr | FE383_RS21600 | Not Available | Negative | 4453542 - 4454540 | 37569.5 |
| gnt-ii system l-idonate transporter | FE383_RS21605 | Not Available | Negative | 4454607 - 4455926 | 46044.2 |
| gluconate 5-dehydrogenase | FE383_RS21610 | Not Available | Negative | 4455988 - 4456752 | 27564.3 |
| l-idonate 5-dehydrogenase | FE383_RS21615 | Not Available | Negative | 4456776 - 4457807 | 37148.7 |
| gluconokinase | FE383_RS21620 | Not Available | Positive | 4458024 - 4458587 | 21005.2 |
| nadph-dependent aldehyde reductase ahr | FE383_RS21625 | Not Available | Negative | 4458591 - 4459610 | 36503.9 |
| Trna-leu | Not Available | Not Available | Positive | 4459806 - 4459890 | Not Available |
| tyrosine-type recombinase/integrase | FE383_RS21640 | Not Available | Positive | 4460133 - 4461341 | 46103.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





