Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yjgl | FE383_RS21545 | Not Available | Positive | 4438838 - 4440652 | 69581.6 |
| ornithine carbamoyltransferase | FE383_RS21550 | Not Available | Negative | 4440708 - 4441712 | 36909.2 |
| ribonuclease e inhibitor rrab | FE383_RS21555 | Not Available | Positive | 4441874 - 4442290 | 15603.5 |
| gnat family n-acetyltransferase | FE383_RS21560 | Not Available | Negative | 4442435 - 4442938 | 18623.5 |
| yjgn family protein | FE383_RS21565 | Not Available | Positive | 4443131 - 4444327 | 44902.3 |
| valine--trna ligase | FE383_RS21570 | Not Available | Negative | 4444383 - 4447238 | 108198.0 |
| dna polymerase iii subunit chi | FE383_RS21575 | Not Available | Negative | 4447238 - 4447681 | 16633.6 |
| leucyl aminopeptidase | FE383_RS21580 | Not Available | Negative | 4447841 - 4449352 | 54883.1 |
| protein ytga | FE383_RS22570 | Not Available | Positive | 4449506 - 4449556 | 1763.19 |
| lps export abc transporter permease lptf | FE383_RS21585 | Not Available | Positive | 4449619 - 4450719 | 40360.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





