Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1 fructose-bisphosphatase | FE383_RS21445 | Not Available | Negative | 4418012 - 4419010 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | FE383_RS21450 | Not Available | Positive | 4419186 - 4420559 | 49877.0 |
| ribosome biogenesis factor yjga | FE383_RS21455 | Not Available | Negative | 4420715 - 4421266 | 21360.5 |
| metalloprotease pmba | FE383_RS21460 | Not Available | Positive | 4421360 - 4422712 | 48372.4 |
| cytochrome b562 | FE383_RS21465 | Not Available | Positive | 4422891 - 4423256 | 13281.7 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | FE383_RS21470 | Not Available | Negative | 4423301 - 4423765 | 17446.9 |
| anaerobic ribonucleoside-triphosphate reductase | FE383_RS21475 | Not Available | Negative | 4423923 - 4426061 | 80027.0 |
| alpha,alpha-phosphotrehalase | FE383_RS21480 | Not Available | Negative | 4426455 - 4428110 | 63841.0 |
| pts trehalose transporter subunit iibc | FE383_RS21485 | Not Available | Negative | 4428160 - 4429581 | 51084.0 |
| trehalose operon repressor trer | FE383_RS21490 | Not Available | Negative | 4429700 - 4430647 | 34532.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





