Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | FE383_RS21345 | Not Available | Negative | 4395492 - 4396457 | 35210.6 |
| nad(p)h:quinone oxidoreductase | FE383_RS21350 | Not Available | Negative | 4396565 - 4397425 | 29735.2 |
| winged helix-turn-helix transcriptional regulator | FE383_RS21355 | Not Available | Positive | 4397514 - 4397894 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | FE383_RS21360 | Not Available | Negative | 4398023 - 4399966 | 70835.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | FE383_RS21365 | Not Available | Positive | 4400156 - 4400896 | 27177.3 |
| protein ytfi | FE383_RS21370 | Not Available | Positive | 4401108 - 4402046 | 35936.8 |
| ytfj family protein | FE383_RS21375 | Not Available | Negative | 4402109 - 4402663 | 20421.7 |
| duf1107 domain-containing protein | FE383_RS21380 | Not Available | Positive | 4402988 - 4403194 | 8072.24 |
| hemolysin family protein | FE383_RS21385 | Not Available | Negative | 4403273 - 4404616 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase msra | FE383_RS21390 | Not Available | Negative | 4404939 - 4405577 | 23316.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





