Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | FE383_RS21295 | Not Available | Positive | 4388519 - 4388914 | 15187.9 |
| primosomal replication protein n | FE383_RS21300 | Not Available | Positive | 4388921 - 4389235 | 11442.9 |
| 30s ribosomal protein s18 | FE383_RS21305 | Not Available | Positive | 4389240 - 4389467 | 8986.94 |
| 50s ribosomal protein l9 | FE383_RS21310 | Not Available | Positive | 4389509 - 4389958 | 15770.0 |
| duf2686 family protein | FE383_RS21315 | Not Available | Negative | 4390029 - 4390823 | 29741.1 |
| hypothetical protein | FE383_RS21320 | Not Available | Positive | 4391095 - 4391496 | 15311.5 |
| cell division protein ytfb | FE383_RS21325 | Not Available | Negative | 4391480 - 4392118 | 23506.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | FE383_RS21330 | Not Available | Positive | 4392336 - 4392956 | 22217.5 |
| d-serine/d-alanine/glycine transporter | FE383_RS21335 | Not Available | Positive | 4393265 - 4394677 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | FE383_RS21340 | Not Available | Negative | 4394722 - 4395384 | 24884.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





