Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | FE383_RS21195 | Not Available | Positive | 4372676 - 4373407 | 26558.3 |
| yjfi family protein | FE383_RS21200 | Not Available | Positive | 4373534 - 4373935 | 14935.8 |
| pspa/im30 family protein | FE383_RS21205 | Not Available | Positive | 4373954 - 4374652 | 25335.0 |
| yjfk family protein | FE383_RS21210 | Not Available | Positive | 4374703 - 4375362 | 25010.3 |
| duf350 domain-containing protein | FE383_RS21215 | Not Available | Positive | 4375380 - 4375778 | 14224.7 |
| duf1190 domain-containing protein | FE383_RS21220 | Not Available | Positive | 4375788 - 4376426 | 23352.9 |
| glutathionylspermidine synthase family protein | FE383_RS21225 | Not Available | Positive | 4376429 - 4377592 | 45022.0 |
| isovaleryl-coa dehydrogenase | FE383_RS21230 | Not Available | Positive | 4377676 - 4379301 | 60593.5 |
| duf1471 family protease activator yjfn | FE383_RS21235 | Not Available | Negative | 4379418 - 4379693 | 9949.64 |
| biofilm peroxide resistance protein bsma | FE383_RS21240 | Not Available | Negative | 4379842 - 4380171 | 12038.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





