Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | FE383_RS21145 | Not Available | Positive | 4360813 - 4362660 | 67927.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | FE383_RS21150 | Not Available | Positive | 4362653 - 4363603 | 35067.1 |
| rna chaperone hfq | FE383_RS21155 | Not Available | Positive | 4363689 - 4363997 | 11167.0 |
| ribosome rescue gtpase hflx | FE383_RS21160 | Not Available | Positive | 4364073 - 4365353 | 48329.9 |
| ftsh protease activity modulator hflk | FE383_RS21165 | Not Available | Positive | 4365439 - 4366698 | 45547.5 |
| protease modulator hflc | FE383_RS21170 | Not Available | Positive | 4366701 - 4367705 | 37652.0 |
| duf2065 domain-containing protein | FE383_RS21175 | Not Available | Positive | 4367787 - 4367984 | 7166.26 |
| adenylosuccinate synthase | FE383_RS21180 | Not Available | Positive | 4368088 - 4369386 | 47347.7 |
| nitric oxide-sensing transcriptional repressor nsrr | FE383_RS21185 | Not Available | Positive | 4369591 - 4370016 | 15594.0 |
| ribonuclease r | FE383_RS21190 | Not Available | Positive | 4370055 - 4372496 | 92114.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





