Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small ribosomal subunit biogenesis gtpase rsga | FE383_RS21095 | Not Available | Negative | 4353857 - 4354909 | 39195.6 |
| oligoribonuclease | FE383_RS21100 | Not Available | Positive | 4355004 - 4355549 | 20816.8 |
| Trna-gly | Not Available | Not Available | Positive | 4355761 - 4355836 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4355873 - 4355948 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4355984 - 4356059 | Not Available |
| hypothetical protein | FE383_RS21120 | Not Available | Positive | 4356293 - 4356346 | 2056.38 |
| trna epoxyqueuosine(34) reductase queg | FE383_RS21125 | Not Available | Negative | 4356329 - 4357468 | 43075.4 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | FE383_RS21130 | Not Available | Positive | 4357467 - 4359014 | 54653.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | FE383_RS21135 | Not Available | Positive | 4358986 - 4359447 | 16854.0 |
| n-acetylmuramoyl-l-alanine amidase amib | FE383_RS21140 | Not Available | Positive | 4359466 - 4360803 | 47988.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





