Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit frdd | FE383_RS21045 | Not Available | Negative | 4342407 - 4342766 | 13107.8 |
| fumarate reductase subunit frdc | FE383_RS21050 | Not Available | Negative | 4342777 - 4343172 | 15015.8 |
| fumarate reductase iron-sulfur protein | FE383_RS21055 | Not Available | Negative | 4343183 - 4343917 | 27124.5 |
| fumarate reductase (quinol) flavoprotein subunit | FE383_RS21060 | Not Available | Negative | 4343910 - 4345718 | 65975.5 |
| elongation factor p--(r)-beta-lysine ligase | FE383_RS21065 | Not Available | Positive | 4346043 - 4347020 | 36978.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | FE383_RS21070 | Not Available | Positive | 4347239 - 4348741 | 54728.2 |
| protein yjen | FE383_RS21075 | Not Available | Positive | 4348793 - 4349107 | 11819.2 |
| yjeo family protein | FE383_RS21080 | Not Available | Positive | 4349104 - 4349418 | 12638.8 |
| miniconductance mechanosensitive channel mscm | FE383_RS21085 | Not Available | Negative | 4349447 - 4352770 | 123975.0 |
| archaetidylserine decarboxylase | FE383_RS21090 | Not Available | Negative | 4352792 - 4353760 | 35936.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





