Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | FE383_RS20995 | Not Available | Positive | 4334425 - 4336071 | 57332.4 |
| duf4156 domain-containing protein | FE383_RS21000 | Not Available | Positive | 4336209 - 4336562 | 11959.2 |
| yjej family protein | FE383_RS21005 | Not Available | Negative | 4336765 - 4337634 | 32948.9 |
| ef-p beta-lysylation protein epmb | FE383_RS21010 | Not Available | Negative | 4338029 - 4339057 | 38751.9 |
| elongation factor p | FE383_RS21015 | Not Available | Positive | 4339099 - 4339665 | 20592.4 |
| lipoprotein antitoxin entericidin a | FE383_RS21020 | Not Available | Positive | 4339717 - 4339842 | 4359.48 |
| lipoprotein toxin entericidin b | FE383_RS21025 | Not Available | Positive | 4339953 - 4340099 | 4809.81 |
| quaternary ammonium compound efflux smr transporter suge | FE383_RS21030 | Not Available | Positive | 4340275 - 4340592 | 10901.0 |
| lipocalin blc | FE383_RS21035 | Not Available | Negative | 4340589 - 4341122 | 19852.7 |
| blaec family class c beta-lactamase | FE383_RS21040 | Not Available | Negative | 4341211 - 4342344 | 41557.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





