Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylation/transport transcriptional activator cadc | FE383_RS20945 | Not Available | Negative | 4323796 - 4325334 | 57816.1 |
| Trna-phe | Not Available | Not Available | Positive | 4325951 - 4326026 | Not Available |
| transcriptional regulator | FE383_RS20955 | Not Available | Negative | 4326133 - 4326708 | 21932.3 |
| protein-disulfide reductase dsbd | FE383_RS20960 | Not Available | Negative | 4326745 - 4328442 | 61798.7 |
| divalent cation tolerance protein cuta | FE383_RS20965 | Not Available | Negative | 4328418 - 4328756 | 12331.7 |
| anaerobic c4-dicarboxylate transporter dcua | FE383_RS20970 | Not Available | Negative | 4328872 - 4330173 | 45753.5 |
| aspartate ammonia-lyase | FE383_RS20975 | Not Available | Negative | 4330291 - 4331727 | 52359.2 |
| fxsa family protein | FE383_RS20980 | Not Available | Positive | 4332064 - 4332540 | 17693.1 |
| l-methionine/branched-chain amino acid transporter | FE383_RS20985 | Not Available | Negative | 4332556 - 4333812 | 44780.2 |
| co-chaperone groes | FE383_RS20990 | Not Available | Positive | 4334088 - 4334381 | 10387.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





