Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine transferase epta | FE383_RS20845 | Not Available | Negative | 4297347 - 4298990 | 61670.6 |
| arginine/agmatine antiporter | FE383_RS20850 | Not Available | Negative | 4299094 - 4300431 | 46845.3 |
| dna-binding transcriptional activator adiy | FE383_RS20855 | Not Available | Negative | 4300568 - 4301329 | 29008.3 |
| arginine decarboxylase | FE383_RS20860 | Not Available | Negative | 4301654 - 4303921 | 84429.8 |
| transcriptional regulator melr | FE383_RS20865 | Not Available | Negative | 4304120 - 4305028 | 34929.9 |
| alpha-galactosidase | FE383_RS20870 | Not Available | Positive | 4305311 - 4306666 | 50674.9 |
| melibiose:sodium transporter melb | FE383_RS20875 | Not Available | Positive | 4306769 - 4308190 | 52639.5 |
| duf2238 domain-containing protein | FE383_RS20880 | Not Available | Negative | 4308329 - 4308958 | 23443.4 |
| class i fumarate hydratase | FE383_RS20885 | Not Available | Negative | 4309080 - 4310726 | 60108.7 |
| anaerobic c4-dicarboxylate transporter dcub | FE383_RS20890 | Not Available | Negative | 4310804 - 4312144 | 47938.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





