Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 1,5-bisphosphokinase | FE383_RS20745 | Not Available | Negative | 4278924 - 4279481 | 20730.8 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | FE383_RS20750 | Not Available | Negative | 4279481 - 4280617 | 42012.9 |
| phosphonate c-p lyase system protein phnl | FE383_RS20755 | Not Available | Negative | 4280614 - 4281294 | 24706.9 |
| phosphonate c-p lyase system protein phnk | FE383_RS20760 | Not Available | Negative | 4281405 - 4282163 | 27832.6 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | FE383_RS20765 | Not Available | Negative | 4282160 - 4283005 | 31846.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | FE383_RS20770 | Not Available | Negative | 4282998 - 4284062 | 38855.0 |
| phosphonate c-p lyase system protein phnh | FE383_RS20775 | Not Available | Negative | 4284062 - 4284646 | 21028.6 |
| hypothetical protein | FE383_RS20780 | Not Available | Negative | 4284643 - 4285096 | 16478.7 |
| phosphonate metabolism transcriptional regulator phnf | FE383_RS20785 | Not Available | Negative | 4285097 - 4285822 | 27623.1 |
| hypothetical protein | FE383_RS20790 | Not Available | Negative | 4285843 - 4286630 | 28141.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





