Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allose kinase | FE383_RS20695 | Not Available | Negative | 4270269 - 4271198 | 33822.9 |
| d-allulose-6-phosphate 3-epimerase | FE383_RS20700 | Not Available | Negative | 4271182 - 4271877 | 26110.7 |
| d-allose abc transporter permease | FE383_RS20705 | Not Available | Negative | 4271888 - 4272868 | 34317.8 |
| d-allose abc transporter atp-binding protein alsa | FE383_RS20710 | Not Available | Negative | 4272847 - 4274379 | 56748.3 |
| d-allose transporter substrate-binding protein | FE383_RS20715 | Not Available | Negative | 4274506 - 4275441 | 32911.7 |
| murr/rpir family transcriptional regulator | FE383_RS20720 | Not Available | Negative | 4275500 - 4276390 | 32364.1 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | FE383_RS20725 | Not Available | Positive | 4276749 - 4277198 | 16074.3 |
| ddrrrql repeat protein yjdp | FE383_RS20730 | Not Available | Positive | 4277267 - 4277596 | 13469.4 |
| phosphonate metabolism protein phnp | FE383_RS20735 | Not Available | Negative | 4277743 - 4278501 | 27849.3 |
| aminoalkylphosphonate n-acetyltransferase | FE383_RS20740 | Not Available | Negative | 4278503 - 4278937 | 16570.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





