Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase nrfefg subunit nrff | FE383_RS20645 | Not Available | Positive | 4256560 - 4256943 | 14523.9 |
| heme lyase nrfefg subunit nrfg | FE383_RS20650 | Not Available | Positive | 4256940 - 4257536 | 22785.6 |
| glutamate/aspartate:proton symporter gltp | FE383_RS20655 | Not Available | Positive | 4257878 - 4259191 | 47162.1 |
| sel1 family tpr-like repeat protein yjco | FE383_RS20660 | Not Available | Negative | 4259835 - 4260524 | 25061.4 |
| formate dehydrogenase subunit alpha | FE383_RS20665 | Not Available | Negative | 4260618 - 4262765 | 79228.1 |
| multidrug efflux transporter outer membrane subunit mdtp | FE383_RS20670 | Not Available | Negative | 4262963 - 4264429 | 53456.3 |
| multidrug efflux transporter permease subunit mdto | FE383_RS20675 | Not Available | Negative | 4264426 - 4266477 | 76155.1 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | FE383_RS20680 | Not Available | Negative | 4266477 - 4267508 | 36910.3 |
| ytca family lipoprotein | FE383_RS20685 | Not Available | Negative | 4267527 - 4267802 | 10257.1 |
| alkyl sulfatase yjcs | FE383_RS20690 | Not Available | Negative | 4268011 - 4269996 | 73154.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





