Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter | FE383_RS20595 | Not Available | Positive | 4243377 - 4245026 | 60526.5 |
| t3ss effector pentapeptide repeat protein espx5 | FE383_RS20600 | Not Available | Negative | 4245180 - 4246472 | 49381.1 |
| cation/acetate symporter actp | FE383_RS20605 | Not Available | Negative | 4246650 - 4248299 | 59200.7 |
| duf485 domain-containing protein | FE383_RS20610 | Not Available | Negative | 4248296 - 4248610 | 11672.3 |
| acetate--coa ligase | FE383_RS20615 | Not Available | Negative | 4248810 - 4250768 | 72097.5 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | FE383_RS20620 | Not Available | Positive | 4251161 - 4252597 | 53705.7 |
| cytochrome c nitrite reductase pentaheme subunit | FE383_RS20625 | Not Available | Positive | 4252642 - 4253208 | 20715.6 |
| cytochrome c nitrite reductase fe-s protein | FE383_RS20630 | Not Available | Positive | 4253205 - 4253876 | 24640.8 |
| cytochrome c nitrite reductase subunit nrfd | FE383_RS20635 | Not Available | Positive | 4253873 - 4254829 | 35044.4 |
| heme lyase ccmf/nrfe family subunit | FE383_RS20640 | Not Available | Positive | 4254849 - 4256567 | 63395.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





