Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase apha | FE383_RS20545 | Not Available | Positive | 4232811 - 4233524 | 26104.9 |
| secondary thiamine-phosphate synthase enzyme yjbq | FE383_RS20550 | Not Available | Positive | 4233635 - 4234051 | 15656.8 |
| mmcq/yjbr family dna-binding protein | FE383_RS20555 | Not Available | Positive | 4234055 - 4234411 | 13520.2 |
| excinuclease abc subunit uvra | FE383_RS20560 | Not Available | Negative | 4234446 - 4237268 | 103874.0 |
| single-stranded dna-binding protein ssb1 | FE383_RS20565 | Not Available | Positive | 4237522 - 4238058 | 18976.1 |
| yjcb family protein | FE383_RS20570 | Not Available | Negative | 4238157 - 4238438 | 10304.0 |
| c-di-gmp phosphodiesterase pdec | FE383_RS20575 | Not Available | Positive | 4238868 - 4240454 | 60804.7 |
| superoxide response transcriptional regulator soxs | FE383_RS20580 | Not Available | Negative | 4240457 - 4240780 | 12911.6 |
| redox-sensitive transcriptional activator soxr | FE383_RS20585 | Not Available | Positive | 4240866 - 4241330 | 17150.7 |
| guanine/hypoxanthine transporter ghxp | FE383_RS20590 | Not Available | Positive | 4241876 - 4243225 | 45714.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





