Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc uptake transcriptional repressor zur | FE383_RS20495 | Not Available | Negative | 4222885 - 4223400 | 19255.2 |
| protein yjbl | FE383_RS22810 | Not Available | Positive | 4223718 - 4223972 | 9749.9 |
| duf2713 domain-containing protein | FE383_RS20505 | Not Available | Positive | 4223996 - 4224703 | 26674.2 |
| trna dihydrouridine(20/20a) synthase dusa | FE383_RS20510 | Not Available | Positive | 4225066 - 4226103 | 38470.1 |
| envelope stress response protein pspg | FE383_RS20515 | Not Available | Positive | 4226237 - 4226479 | 9024.0 |
| quinone oxidoreductase | FE383_RS20520 | Not Available | Negative | 4226645 - 4227628 | 35174.2 |
| replicative dna helicase | FE383_RS20525 | Not Available | Positive | 4227711 - 4229126 | 52393.1 |
| alanine racemase | FE383_RS20530 | Not Available | Positive | 4229179 - 4230258 | 39155.2 |
| aromatic amino acid transaminase | FE383_RS20535 | Not Available | Positive | 4230511 - 4231704 | 43540.2 |
| protein yjbs | FE383_RS20540 | Not Available | Negative | 4232206 - 4232409 | 7888.61 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





