Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate bypass operon transcriptional repressor iclr | FE383_RS20350 | Not Available | Negative | 4186201 - 4187025 | 29741.1 |
| methionine synthase | FE383_RS20355 | Not Available | Positive | 4187225 - 4190908 | 136005.0 |
| na/pi cotransporter family protein | FE383_RS20360 | Not Available | Positive | 4191128 - 4192759 | 59470.7 |
| dipeptidase pepe | FE383_RS20365 | Not Available | Negative | 4192850 - 4193539 | 24571.7 |
| 23s rrna pseudouridine(2604) synthase rluf | FE383_RS20370 | Not Available | Positive | 4193751 - 4194623 | 32478.5 |
| duf3811 domain-containing protein | FE383_RS20375 | Not Available | Negative | 4194756 - 4195028 | 10532.7 |
| lysine-sensitive aspartokinase 3 | FE383_RS20380 | Not Available | Negative | 4195281 - 4196630 | 48500.6 |
| glucose-6-phosphate isomerase | FE383_RS20385 | Not Available | Positive | 4197155 - 4198804 | 61533.1 |
| exopolysaccharide production protein yjbe | FE383_RS20390 | Not Available | Positive | 4199303 - 4199545 | 7386.46 |
| yjbf family lipoprotein | FE383_RS20395 | Not Available | Positive | 4199659 - 4200297 | 23756.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





