Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaef family permuted papain-like enzyme | FE383_RS00960 | Not Available | Negative | 216178 - 217002 | 29913.9 |
| proline--trna ligase | FE383_RS00965 | Not Available | Negative | 217056 - 218774 | 63696.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | FE383_RS00970 | Not Available | Negative | 218886 - 219593 | 26363.8 |
| rcs stress response system protein rcsf | FE383_RS00975 | Not Available | Negative | 219590 - 219994 | 14164.3 |
| methionine abc transporter substrate-binding lipoprotein metq | FE383_RS00980 | Not Available | Negative | 220112 - 220927 | 29433.3 |
| methionine abc transporter permease meti | FE383_RS00985 | Not Available | Negative | 220967 - 221620 | 23257.6 |
| methionine abc transporter atp-binding protein metn | FE383_RS00990 | Not Available | Negative | 221613 - 222644 | 37790.6 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | FE383_RS00995 | Not Available | Positive | 222832 - 223407 | 21295.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 223770 - 225311 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 225380 - 225456 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





