Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 4130056 - 4131597 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4131769 - 4131844 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4132038 - 4134941 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4135036 - 4135151 | Not Available |
| udp-n-acetylmuramate dehydrogenase | FE383_RS20120 | Not Available | Positive | 4135454 - 4136482 | 37853.1 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | FE383_RS20125 | Not Available | Positive | 4136479 - 4137444 | 35314.2 |
| type i pantothenate kinase | FE383_RS20130 | Not Available | Negative | 4137473 - 4138423 | 36361.8 |
| Trna-thr | Not Available | Not Available | Positive | 4138785 - 4138860 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4138869 - 4138953 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4139070 - 4139144 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





