Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | FE383_RS20045 | Not Available | Positive | 4118398 - 4119402 | 35954.1 |
| acetylglutamate kinase | FE383_RS20050 | Not Available | Positive | 4119410 - 4120186 | 27161.3 |
| argininosuccinate lyase | FE383_RS20055 | Not Available | Positive | 4120247 - 4121620 | 50321.1 |
| dna-binding transcriptional regulator oxyr | FE383_RS20060 | Not Available | Positive | 4121887 - 4122804 | 34278.0 |
| si-specific nad(p)(+) transhydrogenase | FE383_RS20065 | Not Available | Negative | 4122787 - 4124187 | 51563.4 |
| hth-type transcriptional repressor fabr | FE383_RS20070 | Not Available | Positive | 4124518 - 4125168 | 24536.5 |
| yijd family membrane protein | FE383_RS20075 | Not Available | Positive | 4125168 - 4125527 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | FE383_RS20080 | Not Available | Negative | 4125567 - 4126667 | 41969.3 |
| tonb-dependent vitamin b12 receptor btub | FE383_RS20085 | Not Available | Positive | 4127036 - 4128880 | 68410.7 |
| glutamate racemase | FE383_RS20090 | Not Available | Positive | 4128825 - 4129682 | 31003.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





