Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| met regulon transcriptional regulator metj | FE383_RS19950 | Not Available | Negative | 4091475 - 4091792 | 12141.4 |
| cystathionine gamma-synthase | FE383_RS19955 | Not Available | Positive | 4092069 - 4093229 | 41552.8 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | FE383_RS19960 | Not Available | Positive | 4093232 - 4095664 | 88892.8 |
| hypothetical protein | FE383_RS22805 | Not Available | Negative | 4095803 - 4095937 | 5078.36 |
| methylenetetrahydrofolate reductase | FE383_RS19965 | Not Available | Positive | 4096013 - 4096903 | 33104.5 |
| catalase/peroxidase hpi | FE383_RS19970 | Not Available | Positive | 4097232 - 4099412 | 80028.0 |
| cystine transporter yije | FE383_RS19975 | Not Available | Positive | 4099505 - 4100410 | 32867.4 |
| duf1287 domain-containing protein | FE383_RS19980 | Not Available | Negative | 4100437 - 4101054 | 22956.3 |
| bifunctional l-1,2-propanediol dehydrogenase/glycerol dehydrogenase | FE383_RS19985 | Not Available | Negative | 4101329 - 4102432 | 38714.4 |
| fructose-6-phosphate aldolase | FE383_RS19990 | Not Available | Negative | 4102443 - 4103105 | 23556.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





