Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol diphosphatase | FE383_RS19850 | Not Available | Positive | 4073327 - 4074082 | 28452.4 |
| triose-phosphate isomerase | FE383_RS19855 | Not Available | Negative | 4074137 - 4074904 | 26973.3 |
| yiiq family protein | FE383_RS19860 | Not Available | Negative | 4075012 - 4075611 | 21764.1 |
| duf805 domain-containing protein | FE383_RS19865 | Not Available | Positive | 4075712 - 4076152 | 16542.6 |
| duf406 domain-containing protein | FE383_RS19870 | Not Available | Positive | 4076364 - 4076663 | 10776.7 |
| universal stress protein uspd | FE383_RS19875 | Not Available | Positive | 4076690 - 4077118 | 16294.0 |
| ferredoxin--nadp(+) reductase | FE383_RS19880 | Not Available | Negative | 4077123 - 4077869 | 27752.5 |
| class ii fructose-bisphosphatase | FE383_RS19885 | Not Available | Negative | 4077966 - 4078976 | 35854.6 |
| glycerol kinase glpk | FE383_RS19890 | Not Available | Negative | 4079111 - 4080619 | 56233.9 |
| glycerol uptake facilitator protein glpf | FE383_RS19895 | Not Available | Negative | 4080642 - 4081487 | 29781.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





