Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose/proton symporter rhat | FE383_RS19800 | Not Available | Negative | 4062888 - 4063922 | 37292.0 |
| superoxide dismutase | FE383_RS19805 | Not Available | Positive | 4064207 - 4064827 | 23098.2 |
| 2-keto-3-deoxygluconate transporter | FE383_RS19810 | Not Available | Positive | 4065087 - 4066070 | 33671.4 |
| 6-hydroxyaminopurine reductase | FE383_RS19815 | Not Available | Positive | 4066219 - 4066893 | 25344.1 |
| envelope stress sensor histidine kinase cpxa | FE383_RS19820 | Not Available | Negative | 4066999 - 4068372 | 51627.3 |
| envelope stress response regulator transcription factor cpxr | FE383_RS19825 | Not Available | Negative | 4068369 - 4069067 | 26313.7 |
| cell-envelope stress modulator cpxp | FE383_RS19830 | Not Available | Positive | 4069217 - 4069717 | 18966.4 |
| cdf family cation-efflux transporter fief | FE383_RS19835 | Not Available | Positive | 4069866 - 4070768 | 32929.2 |
| 6-phosphofructokinase | FE383_RS19840 | Not Available | Positive | 4070949 - 4071911 | 34844.2 |
| sulfate/thiosulfate abc transporter substrate-binding protein sbp | FE383_RS19845 | Not Available | Positive | 4072231 - 4073220 | 36661.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





