Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | FE383_RS00910 | Not Available | Positive | 205125 - 208607 | 129912.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | FE383_RS00915 | Not Available | Positive | 208620 - 209579 | 35243.6 |
| lysine decarboxylase ldcc | FE383_RS00920 | Not Available | Positive | 209678 - 211819 | 80594.9 |
| voc family protein | FE383_RS00925 | Not Available | Positive | 211876 - 212265 | 14737.4 |
| trna lysidine(34) synthetase tils | FE383_RS00930 | Not Available | Positive | 212330 - 213628 | 48206.9 |
| rho-binding antiterminator | FE383_RS00935 | Not Available | Negative | 213677 - 213937 | 9698.45 |
| yaep family protein | FE383_RS00940 | Not Available | Negative | 213924 - 214124 | 7214.59 |
| yaeq family protein | FE383_RS00945 | Not Available | Positive | 214290 - 214835 | 20877.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | FE383_RS00950 | Not Available | Positive | 214832 - 215254 | 15624.0 |
| envelope stress response activation lipoprotein nlpe | FE383_RS00955 | Not Available | Positive | 215268 - 215978 | 25845.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





