Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage integrase | FE383_RS01405 | Not Available | Negative | 285074 - 286474 | 53077.0 |
| Attr | Not Available | Not Available | Positive | 286584 - 286643 | Not Available |
| Attl | Not Available | Not Available | Positive | 553966 - 554012 | Not Available |
| Integrase | FE383_RS02685 | Not Available | Negative | 554026 - 555189 | 45092.5 |
| Exonuclease | FE383_RS02690 | Not Available | Negative | 555309 - 555587 | 11117.3 |
| Replication protein p | FE383_RS02695 | Not Available | Positive | 555587 - 555898 | 11641.1 |
| Ren protein | FE383_RS02700 | Not Available | Positive | 555895 - 555984 | 3120.76 |
| Is3 transposase b | FE383_RS02705 | Not Available | Positive | 556053 - 557215 | 45023.8 |
| Ren protein | FE383_RS02710 | Not Available | Positive | 557246 - 557458 | 8058.85 |
| Putative quaternary ammonium compound-resistance protein qace | FE383_RS02715 | Not Available | Positive | 557526 - 557858 | 11959.1 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





