Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative frv operon regulatory protein | FE383_RS19750 | Not Available | Negative | 4051504 - 4053252 | 66003.6 |
| aminopeptidase | FE383_RS19755 | Not Available | Negative | 4053252 - 4054322 | 38735.7 |
| pts fructose-like transporter subunit iibc | FE383_RS19760 | Not Available | Negative | 4054312 - 4055763 | 51123.5 |
| pts fructose transporter subunit iia | FE383_RS19765 | Not Available | Negative | 4055774 - 4056220 | 16094.4 |
| l-rhamnose mutarotase | FE383_RS19770 | Not Available | Negative | 4056521 - 4056835 | 12265.5 |
| rhamnulose-1-phosphate aldolase | FE383_RS19775 | Not Available | Negative | 4056845 - 4057669 | 30147.2 |
| l-rhamnose isomerase | FE383_RS19780 | Not Available | Negative | 4058120 - 4059379 | 47202.0 |
| rhamnulokinase | FE383_RS19785 | Not Available | Negative | 4059376 - 4060845 | 54072.1 |
| hth-type transcriptional activator rhas | FE383_RS19790 | Not Available | Positive | 4061133 - 4061969 | 32317.2 |
| hth-type transcriptional activator rhar | FE383_RS19795 | Not Available | Positive | 4062043 - 4062891 | 32374.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





