Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid biosynthesis protein faby | FE383_RS19705 | Not Available | Positive | 4040894 - 4041835 | 35339.4 |
| hypothetical protein | FE383_RS22670 | Not Available | Positive | 4042246 - 4042311 | 2534.12 |
| copg family transcriptional regulator | FE383_RS19710 | Not Available | Positive | 4042688 - 4042906 | 8408.23 |
| protein yiif | FE383_RS19715 | Not Available | Positive | 4043124 - 4043366 | 9244.94 |
| formate dehydrogenase accessory protein fdhe | FE383_RS19720 | Not Available | Negative | 4043696 - 4044625 | 34748.6 |
| formate dehydrogenase cytochrome b556 subunit | FE383_RS19725 | Not Available | Negative | 4044622 - 4045257 | 24607.7 |
| formate dehydrogenase o subunit beta | FE383_RS19730 | Not Available | Negative | 4045254 - 4046156 | 33102.1 |
| formate dehydrogenase-n subunit alpha | FE383_RS19735 | Not Available | Negative | 4046169 - 4049219 | 112405.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | FE383_RS19740 | Not Available | Positive | 4049413 - 4050246 | 30561.8 |
| yiig family protein | FE383_RS19745 | Not Available | Positive | 4050399 - 4051454 | 39296.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





