Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoquinovosidase | FE383_RS19655 | Not Available | Negative | 4030637 - 4032673 | 77278.9 |
| aldose-1-epimerase | FE383_RS19660 | Not Available | Negative | 4032872 - 4033774 | 33139.6 |
| sulfoquinovose isomerase | FE383_RS19665 | Not Available | Negative | 4033912 - 4035153 | 47435.0 |
| sulfofructosephosphate aldolase | FE383_RS19670 | Not Available | Negative | 4035170 - 4036048 | 31984.9 |
| sulfolactaldehyde 3-reductase | FE383_RS19675 | Not Available | Negative | 4036072 - 4036968 | 31160.1 |
| sulfofructose kinase | FE383_RS19680 | Not Available | Positive | 4037136 - 4038032 | 31729.4 |
| deor/glpr family dna-binding transcription regulator | FE383_RS19685 | Not Available | Positive | 4038066 - 4038851 | 28509.0 |
| glucose-1-phosphatase | FE383_RS19690 | Not Available | Positive | 4038950 - 4039549 | 22733.0 |
| virulence factor brkb family protein | FE383_RS19695 | Not Available | Positive | 4039543 - 4040415 | 32840.7 |
| d-aminoacyl-trna deacylase | FE383_RS19700 | Not Available | Positive | 4040412 - 4040849 | 15951.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





