Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(i) | FE383_RS19605 | Not Available | Negative | 4017266 - 4018675 | 52257.9 |
| nitrogen regulation protein nr(ii) | FE383_RS19610 | Not Available | Negative | 4018687 - 4019736 | 38558.5 |
| glutamate--ammonia ligase | FE383_RS19615 | Not Available | Negative | 4020022 - 4021431 | 51906.6 |
| ribosome-dependent gtpase typa | FE383_RS19620 | Not Available | Positive | 4021804 - 4023627 | 67359.5 |
| gntr family transcriptional regulator | FE383_RS19625 | Not Available | Positive | 4023844 - 4024554 | 26940.3 |
| sugar phosphate isomerase/epimerase family protein | FE383_RS19630 | Not Available | Positive | 4024562 - 4025542 | 36943.9 |
| mfs transporter | FE383_RS19635 | Not Available | Positive | 4025644 - 4026909 | 46337.9 |
| porin ompl | FE383_RS19640 | Not Available | Negative | 4027000 - 4027692 | 27201.7 |
| mfs transporter | FE383_RS19645 | Not Available | Negative | 4027760 - 4029163 | 51577.1 |
| mfs transporter | FE383_RS19650 | Not Available | Negative | 4029206 - 4030591 | 50985.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





