Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trkh | FE383_RS19500 | Not Available | Positive | 3996542 - 3997993 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | FE383_RS19505 | Not Available | Positive | 3998005 - 3998550 | 21227.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3998928 - 4000469 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4000538 - 4000614 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4000657 - 4000732 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4000916 - 4003820 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4003916 - 4004031 | Not Available |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | FE383_RS19540 | Not Available | Negative | 4004303 - 4004830 | 19364.5 |
| molybdenum cofactor guanylyltransferase moba | FE383_RS19545 | Not Available | Negative | 4004812 - 4005396 | 21644.1 |
| yihd family protein | FE383_RS19550 | Not Available | Positive | 4005466 - 4005735 | 10273.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





