Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tatc | FE383_RS19455 | Not Available | Positive | 3986133 - 3986909 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | FE383_RS19460 | Not Available | Positive | 3986951 - 3987733 | 28975.5 |
| transcription/translation regulatory transformer protein rfah | FE383_RS19465 | Not Available | Negative | 3987730 - 3988218 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | FE383_RS19470 | Not Available | Positive | 3988385 - 3989878 | 55606.8 |
| nad(p)h-flavin reductase | FE383_RS19475 | Not Available | Positive | 3989924 - 3990625 | 26243.5 |
| hypothetical protein | FE383_RS22800 | Not Available | Negative | 3990767 - 3990900 | 4565.48 |
| acetyl-coa c-acyltransferase fada | FE383_RS19480 | Not Available | Negative | 3991006 - 3992169 | 40878.7 |
| fatty acid oxidation complex subunit alpha fadb | FE383_RS19485 | Not Available | Negative | 3992179 - 3994368 | 79598.4 |
| xaa-pro dipeptidase | FE383_RS19490 | Not Available | Positive | 3994558 - 3995889 | 50178.9 |
| impact family protein | FE383_RS19495 | Not Available | Positive | 3995889 - 3996503 | 21758.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





