Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator metr | FE383_RS19405 | Not Available | Negative | 3975260 - 3976213 | 35631.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | FE383_RS19410 | Not Available | Positive | 3976450 - 3978711 | 84678.1 |
| dienelactone hydrolase family protein | FE383_RS19415 | Not Available | Negative | 3978751 - 3979566 | 29426.8 |
| uridine phosphorylase | FE383_RS19420 | Not Available | Positive | 3979828 - 3980589 | 27160.7 |
| dna recombination protein rmuc | FE383_RS19425 | Not Available | Positive | 3980730 - 3982157 | 54767.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | FE383_RS19430 | Not Available | Positive | 3982252 - 3983007 | 28074.8 |
| ubiquinone biosynthesis protein ubij | FE383_RS19435 | Not Available | Positive | 3983021 - 3983626 | 22153.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | FE383_RS19440 | Not Available | Positive | 3983623 - 3985263 | 63206.4 |
| sec-independent protein translocase subunit tata | FE383_RS19445 | Not Available | Positive | 3985342 - 3985611 | 9664.5 |
| sec-independent protein translocase protein tatb | FE383_RS19450 | Not Available | Positive | 3985615 - 3986130 | 18421.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





