Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | EK2009 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1134123 bp
Thymine Count
1132866 bp
Guanine Count
1167947 bp
Cytosine Count
1170079 bp
Genome Length
4605015 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yigg | FE383_RS19355 | Not Available | Negative | 3966210 - 3966590 | 14409.0 |
| eama family transporter rard | FE383_RS19360 | Not Available | Negative | 3966685 - 3967575 | 33285.0 |
| acyl-coa thioesterase yigi | FE383_RS19365 | Not Available | Negative | 3967627 - 3968094 | 17163.8 |
| phospholipase a | FE383_RS19370 | Not Available | Positive | 3968259 - 3969128 | 33164.9 |
| atp-dependent dna helicase recq | FE383_RS19375 | Not Available | Positive | 3969261 - 3971090 | 68367.6 |
| threonine export protein rhtc | FE383_RS19380 | Not Available | Positive | 3971154 - 3971774 | 22475.5 |
| homoserine/homoserine lactone efflux protein | FE383_RS19385 | Not Available | Negative | 3971836 - 3972456 | 22428.2 |
| lysophospholipase l2 | FE383_RS19390 | Not Available | Positive | 3972567 - 3973589 | 38980.4 |
| sugar/pyridoxal phosphate phosphatase yigl | FE383_RS19395 | Not Available | Positive | 3973597 - 3974397 | 29709.4 |
| biotin transporter | FE383_RS19400 | Not Available | Positive | 3974473 - 3975372 | 33729.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





